2011 NORTHEASTERN NATURALIST 18(1):61–72
Benthic Diatoms and Heavy Metals in East Foundry Cove
and Constitution Marsh, NY, Post Superfund Restoration
Betsey H. Hallihan1,2,* and Donald R. Roeder3
Abstract - East Foundry Cove and Constitution Marsh are located on the east side of the
Hudson River, 85 km upriver from lower Manhattan. Between 1965 and 1971, Marathon
Battery Company discharged an estimated 51,004 kg of particulate cadmium, and 1569
kg of soluble cadmium were discharged directly into East Foundry Cove, which became
a Superfund site in 1994. Dredging and restoration of East Foundry Cove were completed
in 1996. Cadmium concentrations were reduced from greater than 900 mg/kg to less than
3 mg/kg in East Foundry Cove. Constitution Marsh and South Cove were not included in
Superfund restoration. For this study, 738 surface sediment samples were collected from
15 sampling sites on 8 occasions from 18 September 1997 to 30 October 1998. Diatoms
were identified and enumerated for each collected sample. These data were analyzed
using Bray-Curtis similarity, MDS ordination, analysis of similarity (ANOSIM), and
similarity of percentages (SIMPER). Cadmium concentrations (mg/kg) were also determined
for each sample. Results show the communities of diatoms were different in two
stations (1 and 3) in East Foundry Cove from the remainder of the stations in the study.
However, one East Foundry Cove station (2) was more similar to the stations in South
Cove and the southern stations of Constitution Marsh. Three of the most abundant taxa,
Navicula gregaria, Cyclotella meneghiniana, and Cocconeis placentula var. lineata,
were present in similar proportions at all sampling sites. Navicula gregaria, however,
occurred in greater relative abundance at stations 4 and 5 and in Constitution Marsh,
adjacent to restored East Foundry Cove, than in any other stations.
Introduction
Marathon Battery Company was built in 1952 by the US Army Corps of Engineers
to manufacture nickel-cadmium batteries under military contracts (Hazen
1981). Heavy metals were discharged into the Hudson River at Cold Spring Pier
through the town’s waste treatment facility. In 1965, the company was ordered to
discontinue using the town’s waste treatment facility, and thereafter until 1971
released heavy metal waste directly into Foundry Brook, which flows into East
Foundry Cove. The factory closed in 1979.
Resource Engineering (1983) estimated that 179 metric tons of cadmium were
discharged from the factory into the Hudson River. They estimated that of this, 53
metric tons of cadmium were deposited into the sediments of East Foundry Cove,
resulting in concentrations >900 mg/kg. As a result of these discharges, Foundry
Cove earned the distinction of being the world’s largest cadmium dump site.
1Department of Biology, Lehman College, CUNY Bronx, NY. 2Current address - Department
of Biology and Medical Lab Technology, Bronx Community College, City
University of New York, Bronx, NY 10453. 3Department of Computing, Mathematics
and Natural Science, Bard College at Simon’s Rock, Great Barrington, MA 01230. *Corresponding
author - Betsey.Hallihan@bcc.cuny.edu.
62 Northeastern Naturalist Vol. 18, No. 1
An attempt to remove the most-contaminated sediments in 1973 was generally
unsuccessful (Kneip and Hazen 1979). In 1975, about 30% of Foundry Cove
still had surface cadmium levels in excess of 1000 mg/kg. Although by 1983 that
area was reduced to 8%, the site was declared a priority one Superfund site, and
dredging and restoration were completed in 1996 (EPA Record of Decision R02-
89/97). The relatively uncontaminated Constitution Marsh and South Cove were
not included in the Superfund cleanup.
Unfortunately, little data were collected on benthic diatoms prior to the cleanup.
The New York State Department of Environmental Conservation (1985) used
artificial substrates and reported Nitzschia parvula W. Sm., Coscinodiscus lacustris
Grunow, and Melosira granulata (Ehrenb.) Ralfs as the dominant diatoms
pre-restoration in East Foundry Cove. “Cyclotella meneghiniana and Stephanodiscus
astrea were found in relatively high numbers in Tivoli Bays (their control
site) but not at all in East (Foundry) Cove.” (The New York State Department of
Environmental Conservation 1985).
The objective of this research was to investigate whether diatom (Bacillariophyceae)
communities in Constitution Marsh, South Cove, and East Foundry
Cove differed, and what were the cadmium concentrations in those three areas
post superfund remediation.
Field Site
East Foundry Cove, Constitution Marsh, and South Cove are located on the
east side of the Hudson River, 85 km upriver from lower Manhattan, in Cold
Spring, NY (Fig. 1). The coves and marsh are across the river from the northern
section of West Point Military Academy and Storm King Mountain. Salinity at
West Point averages five parts per thousand, but fluctuates seasonally, tidally,
and with varying freshwater runoff. There are two high tides and two low tides
occurring every 24 hours and 50 minutes, with an average range at West Point of
0.8 m (Limburg et al. 1986).
Constitution Marsh, south of East Foundry Cove, is separated from the Hudson
River by Constitution Island. The Marsh is a 161-ha contiguous area of emergent
marsh plants, predominately Typha angustifolia L. (Narrow-leaved Cattail),
Hibiscus moscheutos L. (Marsh Mallow), Pontederia cordata L. (Pickerelweed),
and mud flats, but the water flows are quite different between the northern and
southern areas of the Marsh.
East Foundry Cove and South Cove are open water areas and have several
freshwater streams flowing into them, thereby reducing the salinity below five
parts per thousand. Only during periods of drought does the salinity increase
above that level. Foundry Brook provides freshwater to East Foundry Cove, and
Indian Brook flows into South Cove adjacent to collection site 12 (Fig.1).
Methods
All sampling was done after the Superfund cleanup and restoration of East
Foundry Cove. Sampling began in September of 1997 and continued until October
1998 on a monthly or twice monthly regiment. In order to evaluate diatom
2011 B.H. Hallihan and D.R. Roeder 63
populations, it was necessary to follow this pattern for a minimum of one year
(Ravera 1979). Sampling, however, could not be done during the months of November
and December since Constitution Marsh and South Cove are an Audubon
bird sanctuary and are off limits to humans during bird-hunting season (J. Rod,
Former director of Constitution Marsh Center, 1997 pers. comm.). Stations 13,
14, and 15 were added during the 30 May 1998 collection as additional reference
sites. They were then sampled until the end of the study period.
Figure 1. Study site showing Constitution Marsh, Foundry Cove, and the location of the
Marathon Battery Factory. Numbers 1–15 refer to sampling sites.
64 Northeastern Naturalist Vol. 18, No. 1
Surface sediments
Surface sediments were collected in triplicate from 15 sampling sites (Fig. 1):
three in East Foundry Cove, six in northern Constitution Marsh, two in southern
Constitution Marsh, and four in South Cove with the LaMotte surface-sediment
grab sampler. Collection depths varied from 1–4 cm, depending on the consistency
of the sediment. Sediments were collected between low and mid-tide on the ebb
tide or on the flood tide. At each sampling location, three replicates were collected
within approximately 5 m of each other. All collected sediments were placed in ziplock
bags, transported to Lehman College, and frozen for later analysis. Sediment
composition and depths were not determined. A total of 18 collections were made
from September 1997 to October 1998.
Sediment digestion
The sediments were digested of organic matter using the EPA method 3051
using a CEM (Matthews, NC) MDS 2000 microwave digester. This method uses
a Teflon closed-vessel, temperature- and pressure-controlled system. The temperature
inside each vessel was 175 °C.
Two grams of wet-weight sediment were dried in a 100 °C oven in glass
petri dishes. Once dried, 0.5 grams were weighed and placed in digestion tubes
along with 10 ml of high-purity, metal-free, nitric acid. The sediment portion
left after digestion, containing diatoms, was rinsed with distilled water, centrifuged,
decanted, and washed three times with distilled water. After the final
rinse, the digested sediment samples were added to 20 ml of distilled water. A
few milliliters were pipetted onto cover slips in plastic evaporation trays and left
undisturbed until evaporation was complete. The cover slips were then mounted
onto glass slides with Naphrax (refractive index 1.69), mounting medium.
Cadmium concentrations from the same samples were determined using a
Perkin Elmer (Norwalk, CT) ICP 3000 XL (inductively coupled plasma-optical
emission spectrometry) with a one-milliliter automatic sampler. Cadmium was
measured at 214.4 nm and 228.8 nm wavelengths.
Diatom analysis
A minimum of 300 diatom valves were counted and identified for each station
replicate and collection date using a Series “R” Bausch and Lomb microscope
equipped with a 98x fluorite objective and 12.5x oculars. The data from the three
replicates (total of 900+ valves) were then combined for each collection, and
these data from all collections were then pooled together for comparison between
stations for the non-parametric analyses.
Taxa were identified according to Barber and Haworth (1981), Dodd (1987),
Hustedt (1930, 1939, 1953, 1959), Krammer and Lange-Bertalot (1986, 1988,
1991a, 1991b), Patrick and Reimer (1967, 1975), Stoermer et al. (1999), and
Vinyard (1979).
Metrics of biotic integrity
The Bray-Curtis community similarity index (Bray and Curtis 1957, Clark
and Warwick 2001) was calculated between stations and collection dates for
2011 B.H. Hallihan and D.R. Roeder 65
both diatom taxa and cadmium data. No data transformations were performed for
Bray-Curtis similarity. These data were then used to calculate multivariate analyses
including multidimensional scaling (MDS), cluster analysis (CA), similarity
of percentage (SIMPER), and analysis of similarity (ANOSIM) using Primer 5
software (Clark and Warwick 2001). The MDS plots of diatom similarity, for
pooled data from all 15 stations were overlaid with cadmium concentrations using
“bubble plots” (Clarke and Warwick 2001).
Two-way ANOVA were performed using Statview software to determine if
significant differences in cadmium, using mean cadmium from the two measured
wavelengths, dates, and station sites, existed. Stations one through twelve were
used in calculating ANOVA.
Results
Cadmium concentrations
Figure 2 shows the mean cadmium concentrations at each station during the
study period. Note that the restored area (East Foundry Cove) stations 1–3 and
the southern Constitution Marsh and South Cove stations (11–15) have reduced
cadmium levels. Stations 4–10 in the unremediated upper Constitution Marsh
contain slightly elevated levels of cadmium. The results from ANOVA (Table 1)
show these differences between stations to be highly statistically significant.
Figure 2. Mean Cadmium concentrations in sediments of sampling sites 1–15 between
October 1997 and October 1998.
66 Northeastern Naturalist Vol. 18, No. 1
Diatom species composition
One hundred eighty-eight taxa were identified. The more dominant taxa, herein
defined as comprising ten percent of all taxa sometime during the study period,
are Achnanthes chilidanos Hohn and Hellerman, A. haukiana Grun. in Cleve &
Grun., A. haukiana var. rostrata Schulz, A. lanceolata (Breb. ex Kutz.) Grun. in
Cleve & Grun., Actinocyclus normanii (Greg. ex Grev.) Hust. ex VanLand., Cocconeis
neodimuata Krammer, C. placentula var. lineata (Ehrenb.) van Heurck,
Cyclotella meneghiniana Kuetz, Navicula gregaria Donk., N. odiosa Wallace,
N. salinarum var. intermedia (Grun. in van Heurck) Cleve, N. viridula (Kuetz)
Ehrenb., Nitzschia frustulum (Kuetz) Grun. in Cleve & Grun., N. frustrulum var.
perpusilla (Rabenh.) Grun. in van Heurck, and N. microcephala Grun. in Cleve
& Grun. A complete list of diatoms and their relative abundances can be found in
Hallihan (2006).
Bray-Curtis community similarity index
The diatom community similarity between stations is illustrated by a dendrogram
(Fig. 3). The dendrogram shows three major clusters. Note the close
similarity between stations four, five, six, eight, and nine (Constitution Marsh)
in Figure 3. The first cluster includes stations 4–10 (sites with slightly elevated
Table 1. ANOVA table of mean cadmium for stations 1–12 (East Foundry Cove, Constitution
Marsh, and South Cove)
d.f. Sum of squares Mean square F-value P-value R-square
Day 17 241.820 14.225 7.194 less than 0.001 0.03489
Sites 11 4840.935 440.085 222.555 less than 0.001 0.69852
Day*sites 187 989.244 5.290 2.675 less than 0.001 0.14274
Unexplained 434 858.202 1.977 0.12383
Total 649 6930.201
Figure 3. Dendrogram of diatom community similarity of stations 1–15 using pooled data
from all collections.
2011 B.H. Hallihan and D.R. Roeder 67
cadmium). Stations 2 and 11–15 form a second cluster (reference sites except
station 2), and stations 1 and 3 (restored East Foundry Cove) form a third cluster.
Stations 1 and 3 in East Foundry Cove were not similar to other stations throughout
the study, but there was a 74% similarity between these two stations.
MDS ordination and cadmium concentrations
The MDS plot (Fig. 4) shows the same data as Fig. 3 but with cadmium levels
(“bubbles”) overlying the two dimensional representation of similarity. Note that
the sites with elevated cadmium (Cluster A in Fig. 3) are closely associated in
Figure 4.
ANOSIM and SIMPER
Results of ANOSIM indicate that the three clusters (A, B, and C) are different
(Fig. 5). The global R of ANOSIM is 0.83, indicating a difference between
the groups. More important are the R-values between clusters A, B, and C. The
R-value between clusters A and B is 0.80 and is less than the global R. However,
the comparison of clusters A and C has a R-value of 0.97, while the comparison
between clusters B and C has a R-value of 0.99.
A summary of SIMPER results is in Table 2. The similarity of taxa in cluster
A is 84.9 percent. The average similarity of cluster B and C is 81.6% and 74.3%,
respectively. The ten most common diatoms in each cluster are summarized
in Table 2. Note that while there are similarities—e.g., Navicula gregaria is
dominant in all three clusters—cluster A contains Bacillaria paradoxa Gmelin
(= Bacillaria paxillifer (O.F. Müll.) Hendy) and the others do not, and Achnanthes
haukiana var. rostrata was not a common diatom in cluster B but was in A and C.
Discussion
The cleanup and restoration of East Foundry Cove greatly reduced cadmium to
levels found at the reference sites in South Cove. The exception to this is station 2,
which is located on the southwestern shore of East Foundry Cove. The mean concentration
of Cd there was 2.1 mg/kg. Although, this is not a significant amount, it
Figure 4. MDS plot
of pooled diatom
data from all collections
from stations
1–15 overlain with
“bubbles” showing
relative Cd concentrations.
68 Northeastern Naturalist Vol. 18, No. 1
is greater than stations 1 and 3 and also greater than the reference stations in South
Cove. The ANOVA results confirm this. Station 2 is located in the area where tidal
currents are greater during the ebb and flood tides. This area may be receiving metals
from the Hudson River and/or from northern Constitution Marsh.
The reference stations, 12–15, had very low levels of cadmium as was expected.
The mean cadmium of these stations was ≤0.2mg/kg, with the exception
of the 3 February 1998 collection where the mean concentration was 1.6 mg/kg.
Cadmium concentrations were the greatest at station 4, which is located on
the southeastern edge of Foundry Pond but was not subject to the restoration. The
pond is separated from Foundry Cove by an old causeway. This is the closest site
to East Foundry Cove in this study and is influenced by water fluctuations during
the ebb and flood tides. The mean cadmium there was 8.6 mg/kg but varied
throughout the collection period. The lowest cadmium level, 2.1 mg/kg, was on
6 January 1998, and the highest (13.5 mg/kg) during the 27 July 1998 collection.
The temporal fluctuation of cadmium will be discussed in another publication.
Two other studies have reported higher cadmium levels than are reported here.
Advanced GeoServices Engineering P.C. (project number 95-219-04) was retained
to do the long-term monitoring of a number of chemical parameters, including cadmium
from 1995 through the present. In 1997–1998, they found between 0.39 and
104 mg/kg Cd (= 30.3) in East Foundry Cove, and 70.9–529 mg/kg Cd (= 175) in
Constitution Marsh (Marano 2010). Mackie et al. (2007) also found higher levels of
Cd in Constitution Marsh surface sediments (= 101.5 mg/kg ± 41.5) than in Foundry
Cove’s western margin (= 14.3 ± 4.9 mg/kg), Foundry Cove’s northern margin
(= 59.7 ± 16.8 mg/kg), or South Cove (= 5.4 ± 1.3 mg/kg) surface sediments.
Figure 5. Analysis of similarity (ANOSIM) of pooled diatom data (global R) showing
similarities between clusters identified in Figure 3.
2011 B.H. Hallihan and D.R. Roeder 69
Our lower Cd concentrations might be a result of sampling and samplingsite
differences. We sampled from the tidal channels within Constitution Marsh,
East Foundry Cove, and South Cove. These channels were subject to intense
tidal flow and subsequent sediment deposition. In addition, we sampled for
epibenthic diatoms and as a result, did not usually penetrate the superficial sediments
regularly. Advanced GeoServices Engineering sampled cores ≈15 cm deep
(P.F. Marano, Advanced GeoServices Engineering P.C., West Chester, PA, pers.
comm.) and Mackie et al. (2007) routinely sampled 0–5 cm of sediment.
The results of ANOSIM indicate differences in the diatom communities between
the clusters A, B, and C. Clusters A and B were less dissimilar (R = 0.8)
than clusters A and C (R = 0.970 and clusters B and C (R = 0.99). This can also
be seen on the dendrogram (Fig. 3) calculated from Bray-Curtis similarity.
Table 2. SIMPER of clusters A (stations 4–10), B (2, 11–15), C (1, 3), and the dominant 10 diatoms
contributing to the similarity of each cluster.
Cluster / Taxa %
Cluster A similarity (84.9%)
Navicula gregaria 19.0
Cocconeis placentula var. lineata 7.7
Cyclotella meneghiniana 7.2
Navicula odiosa 4.9
Navicula lanceolata 4.4
Nitzschia brevissima 3.4
Achnanthes haukiana var. rostrata 3.1
Navicula viridula 3.1
Nitzschia frustrulum var. perpusilla 2.9
Bacillaria paradoxa 2.7
Cluster B similarity (81.6%)
Navicula gregaria 12.4
Cyclotella meneghiniana 11.3
Cocconeis placentula var. lineata 9.9
Navicula salinarum var. intermedia 4.8
Actinocyclus normanii 4.4
Navicula lanceolata 4.3
Nitzschia frustrulum var. perpusilla 4.0
Navicula viridula 3.9
Navicula peregrina 2.9
Cocconeis neodiminuta 2.7
Cluster C similarity (74.3%)
Navicula gregaria 14.6
Achnanthes haukiana var. rostrata 8.6
Cocconeis placentula var. lineata 6.4
Cyclotella meneghiniana 5.3
Nitzschia frustrulum var. perpusilla 5.2
Navicula viridula 5.1
Navicula lanceolata 4.4
Navicula odiosa 4.2
Achnanthes haukiana 3.1
Navicula salinarum var. intermedia 3.0
70 Northeastern Naturalist Vol. 18, No. 1
The results of SIMPER look more closely into these differences. SIMPER
calculates similarity and also dissimilarity. Dissimilarity is also a means of investigating
the differences between the dendrogram clusters designated as A,B,
and C. The dissimilarity between clusters A and B is 24.3%, with Navicula gregaria
contributing 11.6% towards this dissimilarity. The dissimilarity between
clusters A and C is greater, with the average dissimilarity of 28.6%. Two diatoms,
Achnanthes haukiana var. rostrata and Navicula gregaria, contribute 11.8% and
11.3%, respectively. The greatest dissimilarity is between clusters B and C, with
30.4% dissimilarity. Achnanthes haukiana var. rostrata contributes 13% towards
this dissimilarity. Other taxa contribute less than seven percent to the dissimilarity
between the clusters.
SIMPER was used again to investigate the similarity and dissimilarity between
the selected stations. Stations 4 and 5 had a similarity of 91.4%, while stations
13, 14, and 15 were 83.5% similar. The difference in the similarity of these is
the relative abundance of Navicula gregaria, which accounts for 17% of this
91.4% similarity. Navicula gregaria contributes less, only 13%, to the similarity
between stations 13, 14, and 15. Interestingly, the dissimilarity between stations
four and five and 13, 14, and 15 is only 23.5%, and the contribution of N. gregaria
is 10.2%. The other diatom contributing to the dissimilarity of these groups
is Navicula salinarum var. intermedia. Its abundance is slightly greater in the
South Cove stations of 13, 14, and 15.
Two other clusters were then compared. Stations 4–9 were compared to stations
1, 2, and 3. The similarity of stations 4–9 was 86.2%, with N. gregaria, the
most abundant taxon, contributing 18% to the similarity. Other taxa contributed
less than 8% to the similarity between these stations. Stations 1, 2, and 3 were
only 73.6% similar, with N. gregaria contributing 10% and Achnanthes haukiana
var. rostrata contributing 7% towards the similarity. When comparing these two
clusters, N. gregaria contributed 14.6% towards the dissimilarity and A. haukiana
var. rostrata contributed 9.1%. Other taxa contributed less than five percent
towards the dissimilarity.
Three species identified in the SIMPER analysis (Table 2) do contribute to this
dissimilarity. Actinocyclus normanii, Navicula peregrina (Ehrenb.) Kuetz., and
Cocconeis neodiminuta were found only in cluster B at greater than 2.5% relative
abundance. Only in cluster A did Nitzschia brevissima Grun. in van Heurck occur
at greater than 2% relative abundance, while Navicula minima Grun. in van Heurck
was found only in cluster C at a relative abundance greater than 2%. These results
indicates that the relatively rare species are contributing significantly to the similarity
and dissimilarity between the three groups.
In this study, ANOSIM demonstrates that there are differences between the
stations in East Foundry Cove, Constitution Marsh, and South Cove. However,
SIMPER discloses that there are no striking differences in community structure.
The results indicate that stations 4 and 5 had larger relative abundances of
Navicula gregaria, which contributed greatly to the 91.4% similarity between
these stations. These are not in close proximity spatially to each other, as was
earlier noted. They do both contain the highest concentrations of cadmium. Several
authors have reported heavy-metal tolerant species of diatoms (e.g., Ivorra
2000). In laboratory experiments, she reported that “Navicula gregaria performed
significantly better in the P (phosphorus) Cd + P and Cd treatments ….”
2011 B.H. Hallihan and D.R. Roeder 71
Most of these studies use mesocosms and microcosms, comparative analysis of
diatom communities upstream and downstream from a point source of pollution,
and translocation experiments. So, the outcome of this study is more difficult to
interpret or compare to those, but raises the following questions for further research.
Does this mean that this diatom is more tolerant or that the other species
are more sensitive to higher levels of cadmium and nickel? Is this an example of
pollution-induced community tolerance as indicated by Blanck et al. (1988)?
Finally, we hypothesize that sediment or substrate differences might explain
the differences observed in the diatom communities. For instance, why were the
diatoms at station 2 more similar to the reference sites than in the adjacent East
Foundry Cove stations? Sediment characterization was not part of this study.
However, we observed casually throughout the study that station 2 sediments
were consistently composed of fine silty-clay particles, as were those in stations
4–15. The sediments at stations 1 and 3 varied over the course of study. Kelaher
et al. (2003) discussed in detail the sediments in East Foundry Cove, North Cove
(North of Cold Spring), and South Cove, and concluded that sediment compaction
greatly influences macrobenthic assemblages. We believe these differences
should be examined in future research.
Acknowledgments
We would like to thank Thomas Jensen and Michael Baxter from Lehman College,
Thomas Ruehli and Balori Paulori at Bronx Community College, Paul Marano of Advanced
GeoServices P.C., West Chester, PA , and all the field assistants from Bard College
at Simon’s Rock.
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